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PhenomicDB is a multi-organism phenotype-genotype database including human, mouse, fruit fly, C.elegans, and other model organisms.
The inclusion of gene indices (NCBI Gene) and orthologues (same gene in different organisms) from HomoloGene allows to compare phenotypes of a given gene over many organisms simultaneously.
PhenomicDB contains data from publicly available primary databases: FlyBase, Flyrnai.org, WormBase, Phenobank, CYGD, MatDB, OMIM, MGI, ZFIN, SGD, DictyBase, NCBI Gene, and HomoloGene.
View cluster statistics
Statistics
Organism
Phenotypes
Genotypes
all
with orthologues
Caenorhabditis elegans
143727
94701
8622
Dictyostelium discoideum
12564
13893
0
Fruit fly
172424
35895
9229
Human
9260
44456
18867
Mouse
33536
115936
20744
Yeast
101650
7224
4854
Zebrafish
14683
50323
20357
Other
23238
11282883
174897
How to link to PhenomicDB using e.g. RefSeq identifiers
PhenomicDB in Science: From Gene To Flesh,
Citing PhenomicDB

Last Updated: 15 May 2013; freeze date: 8 March 2013
PhenomicDB Version 3.8 Database release notes
PhenomicDB features Drug2Gene
Drug2Gene
Biobar features PhenomicDB
Biobar


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